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Rattus norvegicus Top 500 InterPro Domains in the Ensembl Database

This table was generated on Tue Sep 26 13:13:12 BST 2006

No.	Interpro name	Number of genes	Number of Ensembl hits	No.	Interpro name	Number of genes	Number of Ensembl hits
1	IPR000725 Olfactory receptor	1147	18193	251	IPR000509 Ribosomal protein L36E	13	18
2	IPR004244 L1 transposable element	452	480	252	IPR000315 Zinc finger, B-box	13	207
3	IPR007086 Zinc finger, C2H2-subtype	367	20662	253	IPR002418 Transcription regulator Myc	13	127
4	IPR001245 Tyrosine protein kinase	329	7874	254	IPR003299 Flagellar calcium-binding protein (calflagin)	13	244
5	IPR002345 Lipocalin	285	1036	255	IPR001079 Galectin, galactose-binding lectin	13	76
6	IPR001680 WD-40 repeat	230	5183	256	IPR000159 RA	13	101
7	IPR003599 Immunoglobulin subtype	227	2846	257	IPR003979 Tropoelastin	13	593
8	IPR001611 Leucine-rich repeat	202	5210	258	IPR001671 Melanocortin/ACTH receptor	13	263
9	IPR000276 Rhodopsin-like GPCR superfamily	169	2971	259	IPR001214 Nuclear protein SET	13	45
10	IPR000533 Tropomyosin	169	1749	260	IPR000449 Ubiquitin-associated	13	90
11	IPR000694 Proline-rich region	155	284	261	IPR001401 Dynamin	13	322
12	IPR002110 Ankyrin	153	5712	262	IPR000917 Sulfatase	13	54
13	IPR007087 Zinc finger, C2H2-type	148	2699	263	IPR003653 Peptidase C48, SUMO/Sentrin/Ubl1	13	36
14	IPR001806 Ras GTPase	133	2255	264	IPR006028 Gamma-aminobutyric acid A receptor	13	280
15	IPR001314 Peptidase S1A, chymotrypsin	131	1970	265	IPR002464 ATP-dependent helicase, DEAH-box	13	148
16	IPR000504 RNA-binding region RNP-1 (RNA recognition motif)	131	1160	266	IPR004301 Nucleoplasmin	12	14
17	IPR000173 Glyceraldehyde 3-phosphate dehydrogenase	129	889	267	IPR003071 Orphan nuclear receptor, HMR type	12	140
18	IPR002048 Calcium-binding EF-hand	112	1456	268	IPR001778 Pollen allergen Poa pIX/Phl pVI, C-terminal	12	77
19	IPR001841 Zinc finger, RING-type	110	931	269	IPR000467 D111/G-patch	12	82
20	IPR000135 High mobility group box HMG1 and HMG2	105	1512	270	IPR001064 Beta and gamma crystallin	12	188
21	IPR001452 Src homology-3	104	3062	271	IPR001283 Allergen V5/Tpx-1 related	12	269
22	IPR013106 Immunoglobulin V-set	103	931	272	IPR002403 E-class P450, group IV	12	264
23	IPR001356 Homeobox	101	1107	273	IPR004045 Glutathione S-transferase, N-terminal	12	34
24	IPR002126 Cadherin	97	4508	274	IPR002452 Alpha tubulin	12	395
25	IPR006907 Protein of unknown function DUF622	90	167	275	IPR001564 Nucleoside diphosphate kinase	12	129
26	IPR000104 Antifreeze protein, type I	86	1276	276	IPR001412 Aminoacyl-tRNA synthetase, class I	12	61
27	IPR000337 GPCR, family 3, metabotropic glutamate receptor-like	83	5992	277	IPR002675 Ribosomal L38e protein	12	12
28	IPR004072 Vomeronasal receptor, type 1	81	686	278	IPR000108 Neutrophil cytosol factor 2	12	412
29	IPR002952 Eggshell protein	78	970	279	IPR000454 ATPase, F0 complex, subunit C	12	62
30	IPR013026 Tetratricopeptide region	74	1316	280	IPR003915 Polycystic kidney disease type 2 protein	12	197
31	IPR000047 Helix-turn-helix motif, lambda-like repressor	69	909	281	IPR002223 Proteinase inhibitor I2, Kunitz metazoa	12	282
32	IPR001092 Basic helix-loop-helix dimerisation region bHLH	63	298	282	IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase	12	129
33	IPR000008 C2	61	1465	283	IPR001958 Tetracycline resistance protein	12	84
34	IPR001849 Pleckstrin-like	60	474	284	IPR002405 Inhibin, alpha subunit	12	107
35	IPR001921 Ribosomal protein L7A	60	568	285	IPR003924 Latrophilin receptor	12	615
36	IPR000626 Ubiquitin	59	463	286	IPR001199 Cytochrome b5	12	74
37	IPR002347 Glucose/ribitol dehydrogenase	59	877	287	IPR008343 MAP kinase phosphatase	12	173
38	IPR002401 E-class P450, group I	59	3319	288	IPR000243 Peptidase T1A, proteasome beta-subunit	12	70
39	IPR003006 Immunoglobulin/major histocompatibility complex	55	587	289	IPR008368 Voltage-dependent calcium channel gamma	12	66
40	IPR000719 Protein kinase	54	494	290	IPR002123 Phospholipid/glycerol acyltransferase	12	37
41	IPR000980 SH2 motif	54	821	291	IPR000530 Ribosomal protein S12E	12	69
42	IPR001147 Ribosomal protein L21e	53	79	292	IPR002398 Peptidase C14, caspase precursor p45	12	259
43	IPR002353 Type II antifreeze protein	53	694	293	IPR001713 Proteinase inhibitor I25A, stefin A	12	76
44	IPR003962 Fibronectin, type III subdomain	52	3584	294	IPR001196 Ribosomal protein L15	12	33
45	IPR001553 RecA bacterial DNA recombination	51	168	295	IPR003598 Immunoglobulin C2 type	12	51
46	IPR001478 PDZ/DHR/GLGF	49	539	296	IPR002394 Nicotinic acetylcholine receptor	12	175
47	IPR003879 Butyrophylin-like	46	1459	297	IPR013057 Amino acid transporter, transmembrane	11	30
48	IPR000608 Ubiquitin-conjugating enzyme, E2	45	212	298	IPR001507 Endoglin/CD105 antigen	11	118
49	IPR001394 Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2	44	394	299	IPR001494 Importin-beta, N-terminal	11	57
50	IPR004073 Vomeronasal receptor, type 2	44	2279	300	IPR004344 Tubulin-tyrosine ligase	11	16
51	IPR001781 LIM, zinc-binding	44	830	301	IPR000348 emp24/gp25L/p24	11	28
52	IPR002049 EGF-like, laminin	44	4313	302	IPR005821 Ion transport	11	66
53	IPR001810 Cyclin-like F-box	44	301	303	IPR000764 Uridine kinase	11	73
54	IPR001005 Myb, DNA-binding	44	403	304	IPR001876 Zinc finger, RanBP2-type	11	101
55	IPR000477 RNA-directed DNA polymerase (Reverse transcriptase)	42	43	305	IPR001266 Ribosomal protein S19e	11	18
56	IPR011545 DEAD/DEAH box helicase, N-terminal	41	313	306	IPR000582 Acyl-coA-binding protein, ACBP	11	73
57	IPR001752 Kinesin, motor region	41	552	307	IPR000817 Prion protein	11	153
58	IPR001965 Zinc finger, PHD-type	40	542	308	IPR001450 4Fe-4S ferredoxin, iron-sulfur binding	11	63
59	IPR002673 Ribosomal L29e protein	40	45	309	IPR002350 Proteinase inhibitor I1, Kazal	11	104
60	IPR002957 Keratin, type I	39	415	310	IPR000001 Kringle	11	360
61	IPR003439 ABC transporter related	39	707	311	IPR002088 Protein prenyltransferase, alpha subunit	11	50
62	IPR006651 Kelch motif	38	999	312	IPR002213 UDP-glucuronosyl/UDP-glucosyltransferase	11	37
63	IPR003596 Immunoglobulin V-type	38	193	313	IPR001854 Ribosomal protein L29	11	27
64	IPR002086 Aldehyde dehydrogenase	37	304	314	IPR002038 Osteopontin	11	69
65	IPR005819 Histone H5	37	411	315	IPR013521 K+ channel, inward rectifier, conserved region 2	11	324
66	IPR001395 Aldo/keto reductase	37	425	316	IPR000904 SEC7-like	11	86
67	IPR001766 Fork head transcription factor	36	471	317	IPR001279 Beta-lactamase-like	11	15
68	IPR002219 Protein kinase C, phorbol ester/diacylglycerol binding	36	1018	318	IPR004182 GRAM	11	68
69	IPR002343 Paraneoplastic encephalomyelitis antigen	36	780	319	IPR001780 Ribosomal protein L35Ae	11	20
70	IPR000242 Tyrosine specific protein phosphatase	35	1247	320	IPR001411 Tetracycline resistance protein TetB	11	102
71	IPR002130 Peptidyl-prolyl cis-trans isomerase, cyclophilin type	34	396	321	IPR008080 Parvalbumin	11	266
72	IPR000210 BTB	34	198	322	IPR001173 Glycosyl transferase, family 2	11	47
73	IPR000886 Endoplasmic reticulum targeting sequence	34	266	323	IPR006055 Exonuclease	11	38
74	IPR000225 Armadillo	34	660	324	IPR003590 Leucine-rich repeat, ribonuclease inhibitor subtype	11	31
75	IPR000357 HEAT	33	176	325	IPR002108 Actin-binding, cofilin/tropomyosin type	11	65
76	IPR002067 Mitochondrial carrier protein	33	785	326	IPR001848 Ribosomal protein S10	11	62
77	IPR001609 Myosin head, motor region	33	1518	327	IPR002355 Multicopper oxidase, copper-binding site	11	154
78	IPR006030 Molluscan rhodopsin C-terminal tail	32	512	328	IPR002083 MATH	11	66
79	IPR003095 Heat shock protein DnaJ	32	273	329	IPR001380 Ribosomal protein L13e	11	18
80	IPR001125 Recoverin	32	625	330	IPR000859 CUB	11	152
81	IPR000834 Peptidase M14, carboxypeptidase A	31	216	331	IPR001067 Nuclear translocator	11	313
82	IPR004000 Actin/actin-like	31	252	332	IPR009886 HCaRG	11	14
83	IPR003267 Small proline-rich	31	254	333	IPR000702 Ribosomal protein L6	11	18
84	IPR001438 EGF-like, type 2	31	4012	334	IPR002715 Nascent polypeptide-associated complex NAC	11	12
85	IPR000571 Zinc finger, CCCH-type	31	282	335	IPR003191 Guanylate-binding protein	11	44
86	IPR001487 Bromodomain	31	892	336	IPR004299 Membrane bound O-acyl transferase, MBOAT	10	16
87	IPR002119 Histone H2A	31	349	337	IPR001491 Thrombomodulin	10	1099
88	IPR013032 EGF-like region	30	606	338	IPR001584 Integrase, catalytic region	10	11
89	IPR001304 C-type lectin	30	216	339	IPR000648 Oxysterol-binding protein	10	65
90	IPR002035 von Willebrand factor, type A	30	984	340	IPR000867 Insulin-like growth factor-binding protein, IGFBP	10	121
91	IPR001039 MHC class I, alpha chain, alpha1 and alpha2	30	764	341	IPR002198 Short-chain dehydrogenase/reductase SDR	10	69
92	IPR001859 Ribosomal protein P2	29	138	342	IPR003890 Initiation factor eIF-4 gamma, middle	10	55
93	IPR000054 Ribosomal protein L31e	29	40	343	IPR006670 Cyclin	10	37
94	IPR002172 Low density lipoprotein-receptor, class A	29	2651	344	IPR004254 Hly-III related proteins	10	26
95	IPR000198 RhoGAP	29	284	345	IPR003689 Zinc/iron permease	10	15
96	IPR001757 ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter	29	839	346	IPR002999 Tudor	10	90
97	IPR001400 Somatotropin hormone	29	203	347	IPR000651 Guanine nucleotide exchange factor for Ras-like GTPases, N-terminal	10	34
98	IPR008085 Thrombospondin, subtype 1	29	883	348	IPR007593 Interferon-induced transmembrane protein	10	10
99	IPR003091 Voltage-dependent potassium channel	29	1602	349	IPR001734 Na+/solute symporter	10	57
100	IPR001526 CD59 antigen	28	58	350	IPR001569 Ribosomal protein L37e	10	14
101	IPR000863 Sulfotransferase	28	40	351	IPR001697 Pyruvate kinase	10	86
102	IPR000387 Tyrosine specific protein phosphatase and dual specificity protein phosphatase	28	200	352	IPR001925 Porin, eukaryotic type	10	62
103	IPR001683 Phox-like	28	166	353	IPR001336 EGF, type 1	10	186
104	IPR000215 Proteinase inhibitor I4, serpin	28	271	354	IPR003989 Vascular cell adhesion molecule-1	10	583
105	IPR000767 Disease resistance protein	28	549	355	IPR003034 DNA-binding SAP	10	62
106	IPR000418 Ets	27	386	356	IPR005024 Snf7	10	10
107	IPR007960 Mammalian taste receptor	27	33	357	IPR000539 Frizzled protein	10	112
108	IPR004087 KH	27	381	358	IPR002114 Phosphotransferase system, HPr serine phosphorylation site	10	74
109	IPR011701 Major facilitator superfamily MFS_1	27	58	359	IPR000253 Forkhead-associated	10	68
110	IPR013544 Protein of unknown function DUF1725	27	29	360	IPR001388 Synaptobrevin	10	63
111	IPR000301 CD9/CD37/CD63 antigen	27	284	361	IPR004841 Amino acid permease-associated region	10	37
112	IPR001909 KRAB box	27	308	362	IPR000340 Dual specificity protein phosphatase	10	50
113	IPR006689 ARF/SAR superfamily	26	550	363	IPR001515 Ribosomal protein L32e	10	16
114	IPR003593 AAA ATPase	26	196	364	IPR000421 Coagulation factor 5/8 type, C-terminal	10	396
115	IPR000408 Regulator of chromosome condensation, RCC1	26	666	365	IPR002893 Zinc finger, MYND-type	10	71
116	IPR000953 Chromo	25	286	366	IPR000892 Ribosomal protein S26E	10	18
117	IPR001073 Complement C1q protein	25	236	367	IPR001392 Clathrin adaptor complex, medium chain	10	63
118	IPR003882 Pistil-specific extensin-like protein	25	491	368	IPR000997 Cholinesterase	10	124
119	IPR001991 Sodium:dicarboxylate symporter	25	264	369	IPR003409 MORN motif	10	147
120	IPR000795 Protein synthesis factor, GTP-binding	25	344	370	IPR001557 L-lactate/malate dehydrogenase	10	118
121	IPR004827 Basic-leucine zipper (bZIP) transcription factor	25	122	371	IPR000222 Protein phosphatase 2C	10	90
122	IPR001472 Bipartite nuclear localization signal	25	78	372	IPR004075 Interleukin-1 receptor, type I/Toll precursor	10	227
123	IPR000327 POU	24	610	373	IPR003020 HCO3- transporter, eukaryote	10	365
124	IPR000873 AMP-dependent synthetase and ligase	24	131	374	IPR013090 Phospholipase A2, active site	10	62
125	IPR006025 Peptidase M, neutral zinc metallopeptidases, zinc-binding site	24	239	375	IPR005113 uDENN	10	106
126	IPR000342 Regulator of G protein signalling	23	296	376	IPR001630 cAMP response element binding (CREB) protein	10	276
127	IPR000637 HMG-I and HMG-Y, DNA-binding	23	502	377	IPR001071 Cellular retinaldehyde binding/alpha-tocopherol transport	10	118
128	IPR002050 ENV polyprotein (coat polyprotein)	23	23	378	IPR013027 FAD-dependent pyridine nucleotide-disulphide oxidoreductase	10	186
129	IPR011016 RINGv	23	122	379	IPR001895 Guanine-nucleotide dissociation stimulator CDC25	10	154
130	IPR009134 Vascular endothelial growth factor receptor, VEGFR	23	1271	380	IPR001346 Interferon regulatory factor	9	84
131	IPR002349 WW	23	724	381	IPR000911 Ribosomal protein L11	9	33
132	IPR003072 Orphan nuclear receptor, NOR1 type	23	357	382	IPR000152 Aspartic acid and asparagine hydroxylation site	9	740
133	IPR001818 Peptidase M10A and M12B, matrixin and adamalysin	23	495	383	IPR001807 Cl- channel, voltage gated	9	269
134	IPR001565 Synaptotagmin	22	504	384	IPR002453 Beta tubulin	9	324
135	IPR008253 Marvel	22	38	385	IPR000759 Adrenodoxin reductase	9	98
136	IPR000668 Peptidase C1A, papain C-terminal	22	211	386	IPR009149 BR22	9	57
137	IPR003980 Histamine H3 receptor	22	217	387	IPR000308 14-3-3 protein	9	83
138	IPR002190 MAGE protein	22	67	388	IPR001930 Peptidase M1, membrane alanine aminopeptidase	9	73
139	IPR001023 Heat shock protein Hsp70	21	238	389	IPR004156 Organic anion transporter polypeptide OATP	9	67
140	IPR001762 Disintegrin	21	447	390	IPR002524 Cation efflux protein	9	22
141	IPR000299 Band 4.1	21	449	391	IPR000517 Ribosomal protein L30	9	24
142	IPR006187 Claudin tight junction protein	21	192	392	IPR001007 von Willebrand factor, type C	9	284
143	IPR000629 ATP-dependent helicase, DEAD-box	21	169	393	IPR001984 Peptidase S16, lon protease	9	98
144	IPR006662 Thioredoxin-related	21	226	394	IPR004088 KH, type 1	9	89
145	IPR001627 Semaphorin/CD100 antigen	21	234	395	IPR001862 Membrane attack complex component/perforin/complement C9	9	271
146	IPR010916 TonB box, N-terminal	21	114	396	IPR010625 CHCH	9	12
147	IPR000164 Histone H3	21	220	397	IPR001632 G-protein, beta subunit	9	243
148	IPR006077 Vinculin/alpha-catenin	21	341	398	IPR002016 Haem peroxidase, plant/fungal/bacterial	9	43
149	IPR002073 3'5'-cyclic nucleotide phosphodiesterase	20	458	399	IPR000306 Zinc finger, FYVE-type	9	78
150	IPR001164 Arf GTPase activating protein	20	778	400	IPR000552 Ribosomal protein L44E	9	17
151	IPR003054 Type II keratin	20	281	401	IPR002553 Adaptin, N-terminal	9	33
152	IPR000480 Glutelin	20	216	402	IPR000240 Serpin B9 and maspin	9	124
153	IPR000169 Peptidase, cysteine peptidase active site	20	107	403	IPR000426 Proteasome alpha-subunit	9	28
154	IPR000175 Sodium:neurotransmitter symporter	20	542	404	IPR001211 Phospholipase A2	9	125
155	IPR002290 Serine/threonine protein kinase	20	87	405	IPR000538 Link	9	581
156	IPR000182 GCN5-related N-acetyltransferase	19	23	406	IPR001373 Cullin	9	50
157	IPR005816 Secreted growth factor Wnt protein	19	223	407	IPR001892 Ribosomal protein S13	9	21
158	IPR001605 Spectrin/pleckstrin-like	19	588	408	IPR013069 BTB/POZ	9	41
159	IPR002181 Fibrinogen, alpha/beta/gamma chain, C-terminal globular	19	66	409	IPR001310 Histidine triad (HIT) protein	9	62
160	IPR001440 Tetratricopeptide TPR_1	19	449	410	IPR000560 Histidine acid phosphatase	9	30
161	IPR001660 Sterile alpha motif SAM	19	188	411	IPR001169 Integrin beta, C-terminal	9	338
162	IPR001855 Beta defensin	19	25	412	IPR002017 Spectrin repeat	9	207
163	IPR000048 IQ calmodulin-binding region	19	188	413	IPR003960 AAA-protein subdomain	9	46
164	IPR000436 Sushi/SCR/CCP	19	749	414	IPR006117 2-5-oligoadenylate synthetase	9	78
165	IPR005829 Sugar transporter superfamily	19	214	415	IPR007632 Protein of unknown function DUF590	9	25
166	IPR006671 Cyclin, N-terminal	18	103	416	IPR001759 Pentaxin	9	306
167	IPR001202 WW/Rsp5/WWP	18	214	417	IPR004012 RUN	9	64
168	IPR005326 Plectin/S10, N-terminal	18	24	418	IPR013657 UAA transporter	9	19
169	IPR001715 Calponin-like actin-binding	18	300	419	IPR006058 2Fe-2S ferredoxin, iron-sulfur binding site	9	99
170	IPR006162 Phosphopantetheine attachment site	18	112	420	IPR012988 Ribosomal L30, N-terminal	9	22
171	IPR000195 RabGAP/TBC	18	73	421	IPR001464 Annexin	9	607
172	IPR000832 GPCR, family 2, secretin-like	18	340	422	IPR000998 MAM	9	507
173	IPR001019 Guanine nucleotide binding protein (G-protein), alpha subunit	18	356	423	IPR000116 High mobility group proteins HMG-I and HMG-Y	9	78
174	IPR005135 Endonuclease/exonuclease/phosphatase	18	39	424	IPR000679 Zinc finger, GATA-type	9	125
175	IPR002423 Chaperonin Cpn60/TCP-1	18	174	425	IPR000630 Ribosomal protein S8	9	16
176	IPR003993 Treacher Collins syndrome protein Treacle	18	220	426	IPR002971 Mus/Rat 1 allergen	9	688
177	IPR000219 DH	18	186	427	IPR004241 Light chain 3 (LC3)	9	11
178	IPR000500 Connexins	17	199	428	IPR005633 Ribosomal protein L23, N-terminal	9	20
179	IPR000326 Phosphoesterase, PA-phosphatase related	17	61	429	IPR001904 Paxillin	9	115
180	IPR002059 Cold-shock protein, DNA-binding	17	161	430	IPR000850 Adenylate kinase	9	98
181	IPR001148 Carbonic anhydrase, eukaryotic	17	47	431	IPR000960 Flavin-containing monooxygenase FMO	9	456
182	IPR000851 Ribosomal protein S5	17	100	432	IPR003081 Glutathione S-transferase, Mu class	9	66
183	IPR000463 Cytosolic fatty-acid binding	17	95	433	IPR006620 Prolyl 4-hydroxylase, alpha subunit	8	27
184	IPR001878 Zinc finger, CCHC-type	17	151	434	IPR009866 NADH-ubiquinone oxidoreductase, subunit NDUFB4	8	8
185	IPR000010 Proteinase inhibitor I25, cystatin	17	122	435	IPR000286 Histone deacetylase superfamily	8	52
186	IPR006073 GTP1/OBG	17	158	436	IPR001751 Calcium-binding protein, S-100/ICaBP type	8	24
187	IPR000209 Peptidase S8 and S53, subtilisin, kexin, sedolisin	17	222	437	IPR000727 Target SNARE coiled-coil region	8	29
188	IPR003938 EAG/ELK/ERG potassium channel	16	440	438	IPR000535 Major sperm protein	8	14
189	IPR008262 Lipase, active site	16	69	439	IPR004843 Metallophosphoesterase	8	20
190	IPR003961 Fibronectin, type III	16	161	440	IPR000072 Platelet-derived growth factor (PDGF)	8	73
191	IPR000712 Apoptosis regulator Bcl-2, BH	16	140	441	IPR000554 Ribosomal protein S7E	8	10
192	IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding	16	159	442	IPR002052 N-6 Adenine-specific DNA methylase	8	62
193	IPR008331 Ferritin and Dps	16	33	443	IPR006089 Acyl-CoA dehydrogenase	8	54
194	IPR006649 Like-Sm ribonucleoprotein, eukaryotic and archaea-type, core	16	34	444	IPR006634 TRAM, LAG1 and CLN8 homology	8	29
195	IPR000941 Enolase	16	142	445	IPR007110 Immunoglobulin-like	8	15
196	IPR001594 Zinc finger, DHHC-type	16	41	446	IPR006012 Syntaxin/epimorphin family	8	85
197	IPR000413 Integrins alpha chain	16	725	447	IPR006862 Acyl-CoA thioester hydrolase/bile acid-CoA amino acid N-acetyltransferase	8	20
198	IPR001404 Heat shock protein Hsp90	16	153	448	IPR002396 Selectin (CD62E/L/P antigen)	8	539
199	IPR008197 Whey acidic protein, core region	16	219	449	IPR002155 Thiolase	8	63
200	IPR001723 Steroid hormone receptor	16	613	450	IPR001865 Ribosomal protein S2	8	51
201	IPR001623 Heat shock protein DnaJ, N-terminal	16	88	451	IPR002007 Animal haem peroxidase	8	167
202	IPR006186 Serine/threonine-specific protein phosphatase and bis(5-nucleosyl)-tetraphosphatase	16	350	452	IPR000077 Ribosomal protein L39e	8	16
203	IPR001519 Ferritin	16	66	453	IPR002433 Ornithine decarboxylase	8	111
204	IPR001368 TNFR/CD27/30/40/95 cysteine-rich region	16	169	454	IPR005301 Mob1/phocein	8	9
205	IPR002185 Dopamine D4 receptor	15	199	455	IPR007084 BRICHOS	8	8
206	IPR001427 Pancreatic ribonuclease	15	96	456	IPR006977 Yip1 domain	8	11
207	IPR008271 Serine/threonine protein kinase, active site	15	191	457	IPR001873 Na+ channel, amiloride-sensitive	8	140
208	IPR002229 Blood group Rhesus C/E and D polypeptide	15	139	458	IPR002125 CMP/dCMP deaminase, zinc-binding	8	34
209	IPR002951 Atrophin	15	262	459	IPR005404 Kv3.3 voltage-gated K+ channel	8	119
210	IPR008160 Collagen triple helix repeat	15	528	460	IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I	8	166
211	IPR005398 Tubby protein, N-terminal	15	187	461	IPR001753 Enoyl-CoA hydratase/isomerase	8	16
212	IPR000717 Proteasome component region PCI	15	49	462	IPR003914 Rabaptin	8	99
213	IPR001190 Speract/scavenger receptor	15	625	463	IPR001163 Like-Sm ribonucleoprotein, core	8	16
214	IPR000403 Phosphatidylinositol 3- and 4-kinase, catalytic	15	224	464	IPR012163 Sialyltransferase	8	27
215	IPR000079 High mobility group protein HMG14 and HMG17	15	92	465	IPR002291 Phosphorylase kinase, gamma catalytic subunit	8	272
216	IPR000086 NUDIX hydrolase	15	43	466	IPR000754 Ribosomal protein S9	8	16
217	IPR002659 Glycosyl transferase, family 31	15	19	467	IPR002030 Mitochondrial brown fat uncoupling protein	8	175
218	IPR001589 Actin-binding, actinin-type	15	2054	468	IPR005076 Glycosyl transferase, family 6	8	15
219	IPR003663 Sugar transporter	15	250	469	IPR001619 Sec1-like protein	8	13
220	IPR001508 NMDA receptor	15	256	470	IPR000920 Myelin P0 protein	8	80
221	IPR001951 Histone H4	15	156	471	IPR001353 20S proteasome, A and B subunits	8	16
222	IPR000910 HMG1/2 (high mobility group) box	15	99	472	IPR003080 Glutathione S-transferase, alpha class	8	58
223	IPR000471 Interferon alpha, beta and delta	15	121	473	IPR000555 Mov34/MPN/PAD-1	8	33
224	IPR002164 Nucleosome assembly protein (NAP)	15	25	474	IPR001159 Double-stranded RNA binding	8	65
225	IPR000163 Prohibitin	15	129	475	IPR013154 Alcohol dehydrogenase GroES-like	8	15
226	IPR006020 Phosphotyrosine interaction region	15	109	476	IPR000542 Acyltransferase ChoActase/COT/CPT	8	23
227	IPR000558 Histone H2B	14	146	477	IPR007052 CS	8	18
228	IPR001270 Chaperonin clpA/B	14	147	478	IPR001839 Transforming growth factor beta	8	39
229	IPR002473 Small chemokine, C-X-C/Interleukin 8	14	104	479	IPR000804 Clathrin adaptor complex, small chain	8	18
230	IPR002113 Adenine nucleotide translocator 1	14	213	480	IPR000295 Proteinase inhibitor I4, leuserpin 2	8	73
231	IPR003089 Alpha/beta hydrolase	14	130	481	IPR000223 Peptidase S26A, signal peptidase I	8	79
232	IPR002209 Heparin-binding growth factor/Fibroblast growth factor	14	159	482	IPR003690 Mitochodrial transcription termination factor-related	8	78
233	IPR000425 Major intrinsic protein	14	126	483	IPR001398 Macrophage migration inhibitory factor	8	12
234	IPR003671 Spindlin/spermiogenesis-specific protein	14	46	484	IPR004217 Zinc finger, Tim10/DDP-type	7	7
235	IPR013216 Methyltransferase type 11	14	52	485	IPR002087 Anti-proliferative protein	7	73
236	IPR000381 Inhibin, beta B subunit	14	148	486	IPR002337 Beta haemoglobin	7	96
237	IPR000956 Stathmin	14	143	487	IPR002674 Ribosomal L37ae protein	7	14
238	IPR001699 Transcription factor, T-box	14	220	488	IPR003316 Transcription factor E2F/dimerisation partner (TDP)	7	20
239	IPR001239 Proteinase inhibitor I1, Kazal metazoa	14	168	489	IPR000812 Transcription factor TFIIB related	7	108
240	IPR001192 Phosphoinositide-specific phospholipase C (PLC)	14	571	490	IPR000051 SAM (and some other nucleotide) binding motif	7	7
241	IPR007237 CD20/IgE Fc receptor beta subunit	13	15	491	IPR000407 Nucleoside phosphatase GDA1/CD39	7	16
242	IPR001047 Ribosomal protein S8E	13	27	492	IPR002348 Interleukin 1/heparin-binding growth factor	7	55
243	IPR002395 HMW kininogen	13	47	493	IPR001212 Somatomedin B	7	138
244	IPR001300 Peptidase C2, calpain	13	403	494	IPR002373 cAMP-dependent protein kinase	7	158
245	IPR001124 Lipid-binding serum glycoprotein	13	38	495	IPR001382 Glycoside hydrolase, family 47	7	77
246	IPR004825 Insulin/IGF/relaxin	13	110	496	IPR007122 Gelsolin	7	221
247	IPR001770 G-protein, gamma subunit	13	77	497	IPR000641 CbxX/CfqX	7	62
248	IPR000772 Ricin B lectin	13	82	498	IPR001141 Ribosomal protein L27e	7	16
249	IPR000837 Fos transforming protein	13	202	499	IPR008676 MRG	7	11
250	IPR003347 Transcription factor jumonji/aspartyl beta-hydroxylase	13	99	500	IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase	7	130

View top 40 InterPro hits

Ensembl Rat

Rattus norvegicus Top 500 InterPro Domains in the Ensembl Database

This table was generated on Tue Sep 26 13:13:12 BST 2006

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