Click on a chromosome for a closer view
The data on this site is a direct import of the WormBase 160 frozen
dataset. Included are annotated operons, genes, transcripts and cds's
as well as RNAi and BLAST/BLAT homology data. Information about the
location of available fosmid clones is also included.
The WS160 dataset is the 7th frozen release of WormBase C.elegans data. All data used in the frozen releases is available from the WormBase FTP site and links to permanent websites can be found on the WormBase home page.
We have included C.elegans in the Ensembl system to allow people to access the data through the Ensembl user interface (both for visualisation and data mining) and to provide cross-species integration through our comparative genomics resources (such as homologous gene links and protein family pages).
Ensembl RNA data has been updated as follows:
The API has of course been updated to reflect these changes
.| Assembly: | WS160, July 2006 |
| Genebuild: | Wormbase, May 2006 |
| Database version: | 41.160 |
| Known genes: | 20,060 |
| Pseudogenes: | 1,037 |
| RNA genes: | 8 |
| Gene exons: | 139,416 |
| Gene transcripts: | 27,486 |
| Base Pairs*: | 103,015,908 |
| Golden Path Length**: | 100,281,235 |
| Most common InterPro domains: | Top 40 Top 500 |
* Total number of base pairs = sum of lengths of DNA table
** Reference assembly (Golden path) length = sum of non-redundant top level seq regions
© 2008 WTSI / EBI. Ensembl is available to download for public use - please see the code licence for details.
